No. words: 1098; after pruning: 1072


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:675)  346  1.32 0.00 0.26  MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1      300   677 (44)  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   (0)   377     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  174 nodes

 89 str. conn. components

Path
    1    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1     1 
  494  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   183 
  506    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   506 
  510  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   167 
  518    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   518 
  526  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   151 
  530    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   530 
  534  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   143 
  542    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   542 
  554  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   123 
  566    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   566 
  570  C MoSU008R_B05_BF201560Tu02P005G04G101R1_045.ab1   107 
  654    MoSU008F_B05_BF201560Tu02P005G04G101F1_045.ab1   654 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0