No. words: 1140; after pruning: 1114


Histogram of relative pair offsets, for read pairs with multiple alignments:
30     2
32     2
62     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 6.4 (1,1:405)  387  0.00 0.00 0.25  MoSU022F_A04_BF201644Ld03P005C05P005C111F1_032.ab1        6   406 (161)  C MoSU022R_A04_BF201644Ld03P005C05P005C111R1_032.ab1   (173)   400     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C MoSU022R_A04_BF201644Ld03P005C05P005C111R1_032.ab1   573 
  277    MoSU022F_A04_BF201644Ld03P005C05P005C111F1_032.ab1   109 
  293  C MoSU022R_A04_BF201644Ld03P005C05P005C111R1_032.ab1   281 
  393    MoSU022F_A04_BF201644Ld03P005C05P005C111F1_032.ab1   225 
  441  C MoSU022R_A04_BF201644Ld03P005C05P005C111R1_032.ab1   133 
  465    MoSU022F_A04_BF201644Ld03P005C05P005C111F1_032.ab1   297 
  552  C MoSU022R_A04_BF201644Ld03P005C05P005C111R1_032.ab1    23 
  556    MoSU022F_A04_BF201644Ld03P005C05P005C111F1_032.ab1   388 
Contig length: old 734, new 735

Contig length: old 735, new 735
New start: 0