No. words: 1133; after pruning: 1081


Histogram of relative pair offsets, for read pairs with multiple alignments:
30     2
32     2
62     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:405)  380  0.74 0.25 0.49  MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1        2   407 (171)  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   (150)   405     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   555 
  188    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1    38 
  192  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   364 
  208    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1    58 
  224  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   332 
  260    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   110 
  268  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   288 
  304    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   154 
  308  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   248 
  340    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   190 
  424  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1   132 
  444    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   294 
  484  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1    72 
  496    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   346 
  512  C MoSU022R_B04_BF201644Ld04P005C05P005C111R1_030.ab1    44 
  516    MoSU022F_B04_BF201644Ld04P005C05P005C111F1_030.ab1   366 
Contig length: old 727, new 728

Contig length: old 728, new 728
New start: 0