No. words: 1141; after pruning: 1115


Histogram of relative pair offsets, for read pairs with multiple alignments:
30     2
32     2
62     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.3 (1,1:406)  389  0.25 0.00 0.25  MoSU022F_C04_BF201644Ld05P005C05P005C111F1_028.ab1        2   407 (161)  C MoSU022R_C04_BF201644Ld05P005C05P005C111R1_028.ab1   (168)   405     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C MoSU022R_C04_BF201644Ld05P005C05P005C111R1_028.ab1   573 
  440    MoSU022F_C04_BF201644Ld05P005C05P005C111F1_028.ab1   273 
Contig length: old 734, new 735

Contig length: old 735, new 735
New start: 0