No. words: 1013; after pruning: 987


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.1 (1,1:281)  264  0.36 0.36 0.36  MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1        1   281 (402)  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1   (48)   282     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1   330 
  230    MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1   181 
  246  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1    85 
  250    MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1   201 
  254  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1    77 
  266    MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1   217 
  274  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1    57 
  278    MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1   229 
  305  C MoSU022R_B03_BF201644Tu02P005C05P005C111R1_029.ab1    26 
  313    MoSU022F_B03_BF201644Tu02P005C05P005C111F1_029.ab1   264 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0