No. words: 1598; after pruning: 1572


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:999)  584  0.33 0.00 0.00  MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1      218   815 (0)  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   (0)   783   186 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1     1 
  451  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   550 
  455    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   455 
  471  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   530 
  479    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   479 
  483  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   518 
  487    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   487 
  491  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   510 
  499    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   499 
  519  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   482 
  527    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   527 
  571  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   430 
  575    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   575 
  583  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   418 
  591    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   591 
  599  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   402 
  627    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   627 
  635  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   366 
  639    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   639 
  659  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   342 
  683    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   683 
  691  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   310 
  723    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   723 
  727  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   274 
  767    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   767 
  771  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   230 
  779    MoSU014F_C05_BF201699As01P018E05P018E111F1_043.ab1   779 
  783  C MoSU014R_C05_BF201699As01P018E05P018E111R1_043.ab1   218 
Contig length: old 1000, new 1000

Contig length: old 1000, new 1000
New start: 0