No. words: 1557; after pruning: 1531


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:1000)  539  0.00 0.18 0.00  MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1      182   736 (0)  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   (0)   821   266 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1     1 
  359  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   643 
  367    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1   367 
  399  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   603 
  403    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1   403 
  427  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   575 
  431    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1   431 
  455  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   547 
  467    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1   467 
  471  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   531 
  479    MoSU002F_C10_BF201699Ld03P005G02G081F2_070.ab1   479 
  495  C MoSU002R_C10_BF201699Ld03P005G02G081R2_070.ab1   507 
Contig length: old 1001, new 1001

Contig length: old 1001, new 1001
New start: 0