No. words: 1191; after pruning: 1165


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:771)  397  1.19 0.00 0.00  MoSU014F_B06_BF201699Ld04P018E05P018E111F1_046.ab1      244   662 (0)  C MoSU014R_B06_BF201699Ld04P018E05P018E111R1_046.ab1   (0)   529   111 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1    MoSU014F_B06_BF201699Ld04P018E05P018E111F1_046.ab1     1 
  389  C MoSU014R_B06_BF201699Ld04P018E05P018E111R1_046.ab1   384 
  401    MoSU014F_B06_BF201699Ld04P018E05P018E111F1_046.ab1   401 
  413  C MoSU014R_B06_BF201699Ld04P018E05P018E111R1_046.ab1   360 
  417    MoSU014F_B06_BF201699Ld04P018E05P018E111F1_046.ab1   417 
  421  C MoSU014R_B06_BF201699Ld04P018E05P018E111R1_046.ab1   352 
  429    MoSU014F_B06_BF201699Ld04P018E05P018E111F1_046.ab1   429 
  437  C MoSU014R_B06_BF201699Ld04P018E05P018E111R1_046.ab1   336 
Contig length: old 772, new 772

Contig length: old 772, new 772
New start: 0