No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:766)  488  0.59 0.00 0.00  MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1      181   685 (0)  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   (0)   587    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1     1 
  346  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   422 
  350    MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1   350 
  362  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   406 
  382    MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1   382 
  390  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   378 
  406    MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1   406 
  434  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   334 
  510    MoSU014F_C06_BF201699Ld05P018E05P018E111F1_044.ab1   510 
  514  C MoSU014R_C06_BF201699Ld05P018E05P018E111R1_044.ab1   254 
Contig length: old 767, new 767

Contig length: old 767, new 767
New start: 0