No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:765)  396  0.73 0.00 0.00  MoSU014F_D06_BF201699Ld06P018E05P018E111F1_042.ab1      252   664 (0)  C MoSU014R_D06_BF201699Ld06P018E05P018E111R1_042.ab1   (0)   515   103 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1    MoSU014F_D06_BF201699Ld06P018E05P018E111F1_042.ab1     1 
  391  C MoSU014R_D06_BF201699Ld06P018E05P018E111R1_042.ab1   376 
  407    MoSU014F_D06_BF201699Ld06P018E05P018E111F1_042.ab1   407 
  411  C MoSU014R_D06_BF201699Ld06P018E05P018E111R1_042.ab1   356 
  415    MoSU014F_D06_BF201699Ld06P018E05P018E111F1_042.ab1   415 
  435  C MoSU014R_D06_BF201699Ld06P018E05P018E111R1_042.ab1   332 
  455    MoSU014F_D06_BF201699Ld06P018E05P018E111F1_042.ab1   455 
  459  C MoSU014R_D06_BF201699Ld06P018E05P018E111R1_042.ab1   308 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0