No. words: 1111; after pruning: 1071


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:765)  228  4.49 0.00 0.00  MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1        1   267 (0)  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   (78)   766   500 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  108 nodes

 56 str. conn. components

Path
    1  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   844 
   97    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1    19 
  101  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   744 
  105    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1    27 
  119  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   726 
  128    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1    50 
  168  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   677 
  172    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1    94 
  176  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   669 
  186    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1   108 
  194  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   651 
  210    MoSU002F_G10_BF201699Ld07P005G02G081F2_072.ab1   132 
  226  C MoSU002R_G10_BF201699Ld07P005G02G081R2_072.ab1   619 
Contig length: old 844, new 844

Contig length: old 844, new 844
New start: 0