No. words: 1267; after pruning: 1241


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:766)  484  0.40 0.00 0.00  MoSU014F_E06_BF201699Ld07P018E05P018E111F1_040.ab1      151   650 (0)  C MoSU014R_E06_BF201699Ld07P018E05P018E111R1_040.ab1   (0)   617   118 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    MoSU014F_E06_BF201699Ld07P018E05P018E111F1_040.ab1     1 
  342  C MoSU014R_E06_BF201699Ld07P018E05P018E111R1_040.ab1   426 
  350    MoSU014F_E06_BF201699Ld07P018E05P018E111F1_040.ab1   350 
  362  C MoSU014R_E06_BF201699Ld07P018E05P018E111R1_040.ab1   406 
  382    MoSU014F_E06_BF201699Ld07P018E05P018E111F1_040.ab1   382 
  390  C MoSU014R_E06_BF201699Ld07P018E05P018E111R1_040.ab1   378 
  394    MoSU014F_E06_BF201699Ld07P018E05P018E111F1_040.ab1   394 
  398  C MoSU014R_E06_BF201699Ld07P018E05P018E111R1_040.ab1   370 
Contig length: old 767, new 767

Contig length: old 767, new 767
New start: 0