No. words: 830; after pruning: 804


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -1.8 -1.8 (1,1:765)   34 13.79 0.00 0.00  MoSU014F_H06_BF201699Ld10P018E05P018E111F1_034.ab1      388   445 (5)  C MoSU014R_H06_BF201699Ld10P018E05P018E111R1_034.ab1   (1)   379   322 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.8       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  14 nodes

 9 str. conn. components

Path
    1    MoSU014F_H06_BF201699Ld10P018E05P018E111F1_034.ab1     1 
  421  C MoSU014R_H06_BF201699Ld10P018E05P018E111R1_034.ab1   346 
  425    MoSU014F_H06_BF201699Ld10P018E05P018E111F1_034.ab1   425 
  429  C MoSU014R_H06_BF201699Ld10P018E05P018E111R1_034.ab1   338 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0 
S Change at: 391; seg lengths: entry 1, contig 1
S Change at: 399; seg lengths: entry 2, contig 2
S Change at: 433; seg lengths: entry 1, contig 1