No. words: 1098; after pruning: 1072


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:471)  445  1.06 0.00 0.00  MoSU011F_F02_BF201699Ta14P005G02P020D071F1_006.ab1        1   472 (15)  C MoSU011R_F02_BF201699Ta14P005G02P020D071R1_006.ab1   (139)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C MoSU011R_F02_BF201699Ta14P005G02P020D071R1_006.ab1   611 
  526    MoSU011F_F02_BF201699Ta14P005G02P020D071F1_006.ab1   387 
  538  C MoSU011R_F02_BF201699Ta14P005G02P020D071R1_006.ab1    74 
  558    MoSU011F_F02_BF201699Ta14P005G02P020D071F1_006.ab1   419 
  562  C MoSU011R_F02_BF201699Ta14P005G02P020D071R1_006.ab1    50 
  570    MoSU011F_F02_BF201699Ta14P005G02P020D071F1_006.ab1   431 
  589  C MoSU011R_F02_BF201699Ta14P005G02P020D071R1_006.ab1    23 
  605    MoSU011F_F02_BF201699Ta14P005G02P020D071F1_006.ab1   466 
Contig length: old 626, new 626

Contig length: old 626, new 626
New start: 0