No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:597)  584  0.00 0.17 0.00  MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1        1   598 (43)  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   (38)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   637 
  313    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   274 
  321  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   317 
  325    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   286 
  329  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   309 
  357    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   318 
  369  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   269 
  385    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   346 
  401  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   237 
  469    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   430 
  489  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   149 
  493    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   454 
  505  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   133 
  513    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   474 
  537  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1   101 
  541    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   502 
  545  C MoSU021R_G05_BF201699Ta15P005G02P020C081R1_035.ab1    93 
  553    MoSU021F_G05_BF201699Ta15P005G02P020C081F1_035.ab1   514 
Contig length: old 680, new 680

Contig length: old 680, new 680
New start: 0