No. words: 1246; after pruning: 1220


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:572)  549  0.00 0.35 0.00  MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1        1   572 (64)  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1   (36)   574     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1   610 
   50    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1    13 
   54  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1   557 
   69    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1    31 
   77  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1   534 
  109    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1    71 
  133  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1   478 
  513    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   475 
  521  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1    90 
  525    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   487 
  541  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1    70 
  553    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   515 
  561  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1    50 
  577    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   539 
  581  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1    30 
  589    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   551 
  593  C MoSU011R_F03_BF201699Ta15P005G02P020D071R1_021.ab1    18 
  605    MoSU011F_F03_BF201699Ta15P005G02P020D071F1_021.ab1   567 
Contig length: old 673, new 674

Contig length: old 674, new 674
New start: 0