No. words: 1275; after pruning: 1249


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:596)  578  0.00 0.34 0.00  MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1        1   596 (43)  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   (38)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   636 
  125    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1    85 
  129  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   508 
  225    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   185 
  237  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   400 
  249    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   209 
  257  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   380 
  273    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   233 
  297  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   340 
  313    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   273 
  329  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   308 
  341    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   301 
  357  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   280 
  393    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   353 
  401  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   236 
  465    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   425 
  473  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   164 
  497    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   457 
  537  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1   100 
  541    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   501 
  605  C MoSU021R_H05_BF201699Ta16P005G02P020C081R1_033.ab1    32 
  609    MoSU021F_H05_BF201699Ta16P005G02P020C081F1_033.ab1   569 
Contig length: old 678, new 679

Contig length: old 679, new 679
New start: 0