No. words: 1242; after pruning: 1216


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:571)  553  0.00 0.18 0.00  MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1        2   572 (61)  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1   (37)   572     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1   609 
   68    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1    31 
   72  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1   538 
  108    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1    71 
  128  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1   482 
  528    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1   491 
  540  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1    70 
  552    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1   515 
  568  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1    42 
  576    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1   539 
  584  C MoSU011R_F05_BF201699Ta17P005G02P020D071R1_037.ab1    26 
  588    MoSU011F_F05_BF201699Ta17P005G02P020D071F1_037.ab1   551 
Contig length: old 670, new 670

Contig length: old 670, new 670
New start: 0