No. words: 1246; after pruning: 1220


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:568)  535  1.23 0.00 0.00  MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1        1   569 (59)  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1   (49)   569     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1   618 
  489    MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1   440 
  493  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1   126 
  533    MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1   484 
  549  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1    70 
  565    MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1   516 
  573  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1    46 
  577    MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1   528 
  592  C MoSU011R_F06_BF201699Ta18P005G02P020D071R1_038.ab1    27 
  612    MoSU011F_F06_BF201699Ta18P005G02P020D071F1_038.ab1   563 
Contig length: old 677, new 677

Contig length: old 677, new 677
New start: 0