No. words: 1274; after pruning: 1248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:598)  584  0.00 0.17 0.00  MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1        2   599 (43)  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   (33)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   632 
   97    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1    64 
  105  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   528 
  113    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1    80 
  121  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   512 
  177    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   144 
  193  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   440 
  221    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   188 
  229  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   404 
  245    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   212 
  273  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   360 
  277    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   244 
  297  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   336 
  309    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   276 
  325  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   308 
  345    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   312 
  397  C MoSU021R_C06_BF201699Ta19P005G02P020C081R1_044.ab1   236 
  405    MoSU021F_C06_BF201699Ta19P005G02P020C081F1_044.ab1   372 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0