No. words: 1278; after pruning: 1252


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:597)  575  0.50 0.17 0.00  MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1        1   598 (43)  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   (38)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   637 
  178    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   139 
  186  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   452 
  222    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   183 
  234  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   404 
  270    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   231 
  298  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   340 
  346    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   307 
  366  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   272 
  470    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   431 
  506  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   132 
  518    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   479 
  538  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1   100 
  546    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   507 
  614  C MoSU021R_D06_BF201699Ta20P005G02P020C081R1_042.ab1    24 
  618    MoSU021F_D06_BF201699Ta20P005G02P020C081F1_042.ab1   579 
Contig length: old 680, new 680

Contig length: old 680, new 680
New start: 0