No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:595)  582  0.00 0.17 0.00  MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1        1   596 (44)  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   (34)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   631 
  186    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   151 
  202  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   430 
  218    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   183 
  234  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   398 
  250    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   215 
  254  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   378 
  282    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   247 
  294  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   338 
  310    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   275 
  322  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   310 
  346    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   311 
  358  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   274 
  378    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   343 
  386  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   246 
  438    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   403 
  450  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   182 
  490    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   455 
  530  C MoSU021R_A04_BF201699Td01P005G02P020C081R1_032.ab1   102 
  542    MoSU021F_A04_BF201699Td01P005G02P020C081F1_032.ab1   507 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0