No. words: 859; after pruning: 833


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.1 (1,1:380)  369  0.27 0.27 0.00  MoSU012F_A01_BF201699Td01P020A08P005G081F1_015.ab1        5   381 (50)  C MoSU012R_A01_BF201699Td01P020A08P005G081R1_015.ab1   (50)   378     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C MoSU012R_A01_BF201699Td01P020A08P005G081R1_015.ab1   428 
  340    MoSU012F_A01_BF201699Td01P020A08P005G081F1_015.ab1   293 
  352  C MoSU012R_A01_BF201699Td01P020A08P005G081R1_015.ab1    77 
  356    MoSU012F_A01_BF201699Td01P020A08P005G081F1_015.ab1   309 
Contig length: old 478, new 478

Contig length: old 478, new 478
New start: 0