No. words: 1246; after pruning: 1220


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:596)  538  2.68 0.00 0.00  MoSU021F_B04_BF201699Td02P005G02P020C081F1_030.ab1        1   597 (44)  C MoSU021R_B04_BF201699Td02P005G02P020C081R1_030.ab1   (8)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU021R_B04_BF201699Td02P005G02P020C081R1_030.ab1   605 
   12    MoSU021F_B04_BF201699Td02P005G02P020C081F1_030.ab1     4 
  361  C MoSU021R_B04_BF201699Td02P005G02P020C081R1_030.ab1   245 
  365    MoSU021F_B04_BF201699Td02P005G02P020C081F1_030.ab1   357 
  382  C MoSU021R_B04_BF201699Td02P005G02P020C081R1_030.ab1   224 
  386    MoSU021F_B04_BF201699Td02P005G02P020C081F1_030.ab1   378 
Contig length: old 649, new 649

Contig length: old 649, new 649
New start: 0