No. words: 1241; after pruning: 1215


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:571)  548  0.35 0.17 0.00  MoSU011F_E02_BF201699Td02P005G02P020D071F1_008.ab1        1   572 (57)  C MoSU011R_E02_BF201699Td02P005G02P020D071R1_008.ab1   (39)   573     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C MoSU011R_E02_BF201699Td02P005G02P020D071R1_008.ab1   612 
   51    MoSU011F_E02_BF201699Td02P005G02P020D071F1_008.ab1    11 
  339  C MoSU011R_E02_BF201699Td02P005G02P020D071R1_008.ab1   274 
  483    MoSU011F_E02_BF201699Td02P005G02P020D071F1_008.ab1   443 
Contig length: old 669, new 669

Contig length: old 669, new 669
New start: 0