No. words: 1268; after pruning: 1242


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:596)  578  0.00 0.34 0.00  MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1        1   596 (43)  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   (31)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   629 
  174    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   141 
  178  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   452 
  186    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   153 
  190  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   440 
  226    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   193 
  234  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   396 
  346    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   313 
  358  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   272 
  374    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   341 
  390  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   240 
  402    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   369 
  406  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   224 
  418    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   385 
  446  C MoSU021R_C04_BF201699Td03P005G02P020C081R1_028.ab1   184 
  454    MoSU021F_C04_BF201699Td03P005G02P020C081F1_028.ab1   421 
Contig length: old 671, new 672

Contig length: old 672, new 672
New start: 0