No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:596)  583  0.00 0.17 0.00  MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1        1   597 (43)  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   (34)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   632 
  217    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   182 
  229  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   404 
  249    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   214 
  253  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   380 
  281    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   246 
  297  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   336 
  309    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   274 
  313  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   320 
  337    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   302 
  341  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   292 
  377    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   342 
  385  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   248 
  445    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   410 
  449  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   184 
  489    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   454 
  501  C MoSU021R_D04_BF201699Td04P005G02P020C081R1_026.ab1   132 
  509    MoSU021F_D04_BF201699Td04P005G02P020C081F1_026.ab1   474 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0