No. words: 861; after pruning: 835


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:376)  372  0.00 0.00 0.27  MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1        1   377 (39)  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   (69)   376     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   445 
  109    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1    40 
  117  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   329 
  193    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1   124 
  273  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   173 
  289    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1   220 
  325  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   121 
  329    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1   260 
  345  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1   101 
  349    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1   280 
  405  C MoSU012R_A04_BF201699Td04P020A08P005G081R1_032.ab1    41 
  409    MoSU012F_A04_BF201699Td04P020A08P005G081F1_032.ab1   340 
Contig length: old 484, new 485

Contig length: old 485, new 485
New start: 0