No. words: 1117; after pruning: 1091


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:572)  475  0.61 0.00 0.00  MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1        1   494 (0)  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   (50)   573    80 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   623 
   58    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1     8 
   62  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   562 
   74    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1    24 
   94  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   530 
   98    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1    48 
  110  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   514 
  114    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1    64 
  134  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   490 
  146    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1    96 
  154  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   470 
  162    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1   112 
  230  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   394 
  298    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1   248 
  302  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   322 
  310    MoSU011F_E05_BF201699Td05P005G02P020D071F1_039.ab1   260 
  318  C MoSU011R_E05_BF201699Td05P005G02P020D071R1_039.ab1   306 
Contig length: old 623, new 623

Contig length: old 623, new 623
New start: 0