No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:597)  584  0.00 0.17 0.00  MoSU021F_F04_BF201699Td06P005G02P020C081F1_022.ab1        1   598 (43)  C MoSU021R_F04_BF201699Td06P005G02P020C081R1_022.ab1   (33)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU021R_F04_BF201699Td06P005G02P020C081R1_022.ab1   632 
  217    MoSU021F_F04_BF201699Td06P005G02P020C081F1_022.ab1   183 
  229  C MoSU021R_F04_BF201699Td06P005G02P020C081R1_022.ab1   404 
  337    MoSU021F_F04_BF201699Td06P005G02P020C081F1_022.ab1   303 
  341  C MoSU021R_F04_BF201699Td06P005G02P020C081R1_022.ab1   292 
  353    MoSU021F_F04_BF201699Td06P005G02P020C081F1_022.ab1   319 
  385  C MoSU021R_F04_BF201699Td06P005G02P020C081R1_022.ab1   248 
  469    MoSU021F_F04_BF201699Td06P005G02P020C081F1_022.ab1   435 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0