No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:598)  579  0.00 0.34 0.00  MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1        2   598 (43)  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1   (33)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1   632 
  225    MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1   191 
  229  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1   404 
  493    MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1   459 
  501  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1   132 
  517    MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1   483 
  529  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1   104 
  553    MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1   519 
  601  C MoSU021R_G04_BF201699Td07P005G02P020C081R1_020.ab1    32 
  613    MoSU021F_G04_BF201699Td07P005G02P020C081F1_020.ab1   579 
Contig length: old 674, new 675

Contig length: old 675, new 675
New start: 0