No. words: 1147; after pruning: 1121


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:575)  486  0.95 0.38 0.19  MoSU011F_E08_BF201699Td08P005G02P020D071F1_056.ab1        1   525 (0)  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   (45)   577    52 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   622 
   74    MoSU011F_E08_BF201699Td08P005G02P020D071F1_056.ab1    27 
   82  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   541 
  124    MoSU011F_E08_BF201699Td08P005G02P020D071F1_056.ab1    78 
  132  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   491 
  152    MoSU011F_E08_BF201699Td08P005G02P020D071F1_056.ab1   106 
  160  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   463 
  288    MoSU011F_E08_BF201699Td08P005G02P020D071F1_056.ab1   242 
  296  C MoSU011R_E08_BF201699Td08P005G02P020D071R1_056.ab1   327 
Contig length: old 622, new 622

Contig length: old 622, new 622
New start: 0