No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:596)  578  0.00 0.34 0.00  MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1        1   596 (43)  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   (34)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   632 
  181    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   145 
  209  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   424 
  337    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   301 
  341  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   292 
  353    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   317 
  361  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   272 
  377    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   341 
  397  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   236 
  445    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   409 
  453  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   180 
  461    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   425 
  473  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   160 
  481    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   445 
  533  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1   100 
  537    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   501 
  593  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1    40 
  597    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   561 
  609  C MoSU021R_B05_BF201699Td10P005G02P020C081R1_045.ab1    24 
  613    MoSU021F_B05_BF201699Td10P005G02P020C081F1_045.ab1   577 
Contig length: old 674, new 675

Contig length: old 675, new 675
New start: 0