No. words: 1230; after pruning: 1204


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:563)  550  0.00 0.00 0.00  MoSU011F_E10_BF201699Td10P005G02P020D071F1_072.ab1        1   564 (57)  C MoSU011R_E10_BF201699Td10P005G02P020D071R1_072.ab1   (45)   564     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C MoSU011R_E10_BF201699Td10P005G02P020D071R1_072.ab1   609 
  477    MoSU011F_E10_BF201699Td10P005G02P020D071F1_072.ab1   432 
Contig length: old 666, new 666

Contig length: old 666, new 666
New start: 0