No. words: 1596; after pruning: 1570


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 16.1 (1,1:762)  739  0.40 0.00 0.00  MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1        1   756 (36)  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   (41)   763     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   804 
   49    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1     8 
   53  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   752 
   57    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1    16 
   81  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   724 
  102    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1    61 
  126  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   679 
  138    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1    97 
  182  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   623 
  194    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1   153 
  410  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   395 
  414    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1   373 
  426  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   379 
  438    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1   397 
  466  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   339 
  534    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1   493 
  538  C MoSU014R_A05_BF201699Tu01P018E05P018E111R1_047.ab1   267 
  792    MoSU014F_A05_BF201699Tu01P018E05P018E111F1_047.ab1   751 
Contig length: old 833, new 833

Contig length: old 833, new 833
New start: 0