No. words: 1608; after pruning: 1582


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:764)  753  0.00 0.00 0.13  MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1        1   765 (39)  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   (40)   764     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   804 
   44    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1     4 
   56  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   749 
   60    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1    20 
   84  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   721 
   88    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1    48 
  168  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   637 
  172    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   132 
  192  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   613 
  196    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   156 
  228  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   577 
  232    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   192 
  292  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   513 
  296    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   256 
  428  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   377 
  432    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   392 
  480  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   325 
  492    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   452 
  508  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   297 
  516    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   476 
  564  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   241 
  568    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   528 
  592  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   213 
  600    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   560 
  612  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   193 
  664    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   624 
  668  C MoSU014R_B05_BF201699Tu02P018E05P018E111R1_045.ab1   137 
  792    MoSU014F_B05_BF201699Tu02P018E05P018E111F1_045.ab1   752 
Contig length: old 843, new 844

Contig length: old 844, new 844
New start: 0