No. words: 1612; after pruning: 1586


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:1292)  305  0.63 0.31 0.00  MoSU014F_C01_BF292193As01P018A03P018A091F1_011.ab1      476   793 (0)  C MoSU014R_C01_BF292193As01P018A03P018A091R1_011.ab1   (0)   819   501 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1    MoSU014F_C01_BF292193As01P018A03P018A091F1_011.ab1     1 
  550  C MoSU014R_C01_BF292193As01P018A03P018A091R1_011.ab1   744 
  554    MoSU014F_C01_BF292193As01P018A03P018A091F1_011.ab1   554 
  574  C MoSU014R_C01_BF292193As01P018A03P018A091R1_011.ab1   720 
  598    MoSU014F_C01_BF292193As01P018A03P018A091F1_011.ab1   598 
  614  C MoSU014R_C01_BF292193As01P018A03P018A091R1_011.ab1   680 
  642    MoSU014F_C01_BF292193As01P018A03P018A091F1_011.ab1   642 
  646  C MoSU014R_C01_BF292193As01P018A03P018A091R1_011.ab1   648 
Contig length: old 1293, new 1293

Contig length: old 1293, new 1293
New start: 0