No. words: 1508; after pruning: 1482


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:1007)  494  0.00 0.00 0.00  MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1      252   751 (0)  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   (0)   757   258 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1     1 
  444  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   565 
  448    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1   448 
  452  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   557 
  464    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1   464 
  472  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   537 
  488    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1   488 
  492  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   517 
  516    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1   516 
  520  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   489 
  580    MoSU003F_C03_BF292870As01P005H02H081F1_018.ab1   580 
  584  C MoSU003R_C03_BF292870As01P005H02H081R1_018.ab1   425 
Contig length: old 1008, new 1008

Contig length: old 1008, new 1008
New start: 0