No. words: 1412; after pruning: 1372


Histogram of relative pair offsets, for read pairs with multiple alignments:
36     2
68     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0    0.0 0.9 (1,1:1364)   43  2.13 0.00 0.00  MoSU003F_C04_BF292870Ld05P005H02H081F1_022.ab1      561   607 (0)  C MoSU003R_C04_BF292870Ld05P005H02H081R1_022.ab1   (0)   805   759 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  24 nodes

 14 str. conn. components

Path
    1    MoSU003F_C04_BF292870Ld05P005H02H081F1_022.ab1     1 
  564  C MoSU003R_C04_BF292870Ld05P005H02H081R1_022.ab1   802 
  572    MoSU003F_C04_BF292870Ld05P005H02H081F1_022.ab1   572 
  584  C MoSU003R_C04_BF292870Ld05P005H02H081R1_022.ab1   782 
  596    MoSU003F_C04_BF292870Ld05P005H02H081F1_022.ab1   596 
  604  C MoSU003R_C04_BF292870Ld05P005H02H081R1_022.ab1   762 
Contig length: old 1365, new 1365

Contig length: old 1365, new 1365
New start: 0 
S Change at: 707; seg lengths: entry 1, contig 1