No. words: 1406; after pruning: 1380


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.0 -1.0 (1,1:1366)   35  0.00 0.00 2.50  MoSU022F_E10_BF292870Ld07P018F05P018F111F1_072.ab1      630   669 (0)  C MoSU022R_E10_BF292870Ld07P018F05P018F111R1_072.ab1   (0)   737   699 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1    MoSU022F_E10_BF292870Ld07P018F05P018F111F1_072.ab1     1 
  645  C MoSU022R_E10_BF292870Ld07P018F05P018F111R1_072.ab1   722 
  657    MoSU022F_E10_BF292870Ld07P018F05P018F111F1_072.ab1   658 
  665  C MoSU022R_E10_BF292870Ld07P018F05P018F111R1_072.ab1   702 
Contig length: old 1367, new 1366

Contig length: old 1366, new 1367
New start: 0 
I Change at: 658; seg lengths: entry 1, contig 0