No. words: 1527; after pruning: 1501


Histogram of relative pair offsets, for read pairs with multiple alignments:
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:1369)  140  2.56 0.64 0.00  MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1      617   772 (0)  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   (0)   755   599 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  66 nodes

 35 str. conn. components

Path
    1    MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1     1 
  620  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   752 
  624    MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1   624 
  636  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   736 
  644    MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1   644 
  660  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   712 
  711    MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1   711 
  729  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   642 
  752    MoSU003F_F04_BF292870Ld08P005H02H081F1_031.ab1   752 
  764  C MoSU003R_F04_BF292870Ld08P005H02H081R1_031.ab1   607 
Contig length: old 1370, new 1370

Contig length: old 1370, new 1370
New start: 0 
S Change at: 736; seg lengths: entry 1, contig 1