No. words: 1548; after pruning: 1508


Histogram of relative pair offsets, for read pairs with multiple alignments:
36     2
68     2
99    16

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 3.3 (1,1:1367)  166  1.13 0.00 0.56  MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1      584   760 (3)  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   (0)   785   610 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  80 nodes

 42 str. conn. components

Path
    1    MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1     1 
  616  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   753 
  624    MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1   624 
  632  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   737 
  640    MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1   640 
  660  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   709 
  716    MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1   717 
  720  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   649 
  732    MoSU003F_G04_BF292870Ld09P005H02H081F1_024.ab1   733 
  740  C MoSU003R_G04_BF292870Ld09P005H02H081R1_024.ab1   629 
Contig length: old 1368, new 1368

Contig length: old 1368, new 1368
New start: 0