No. words: 1074; after pruning: 1048


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 2.4 (1,1:882)  171  1.09 0.00 0.54  MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1      258   441 (0)  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   (7)   626   444 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  80 nodes

 42 str. conn. components

Path
    1    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1     1 
  322  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   562 
  330    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1   330 
  334  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   550 
  342    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1   342 
  358  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   526 
  362    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1   362 
  366  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   518 
  370    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1   370 
  398  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   486 
  428    MoSU003F_A03_BF292870Tu01P005H02H081F1_017.ab1   429 
  436  C MoSU003R_A03_BF292870Tu01P005H02H081R1_017.ab1   448 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0