No. words: 1350; after pruning: 1324


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:861)  481  0.20 0.00 0.00  MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1      182   669 (0)  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   (0)   681   194 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1     1 
  221  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   642 
  225    MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1   225 
  397  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   466 
  401    MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1   401 
  421  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   442 
  429    MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1   429 
  437  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   426 
  457    MoSU022F_A09_BF292870Tu01P018F05P018F111F1_079.ab1   457 
  461  C MoSU022R_A09_BF292870Tu01P018F05P018F111R1_079.ab1   402 
Contig length: old 862, new 862

Contig length: old 862, new 862
New start: 0