No. words: 1506; after pruning: 1480


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:852)  640  0.31 0.00 0.00  MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1      130   782 (0)  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   (0)   724    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1     1 
  137  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   717 
  141    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   141 
  145  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   709 
  245    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   245 
  253  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   601 
  261    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   261 
  265  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   589 
  269    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   269 
  297  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   557 
  325    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   325 
  329  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   525 
  345    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   345 
  357  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   497 
  385    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   385 
  401  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   453 
  413    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   413 
  417  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   437 
  421    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   421 
  433  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   421 
  445    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   445 
  449  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   405 
  513    MoSU022F_B09_BF292870Tu02P018F05P018F111F1_077.ab1   513 
  517  C MoSU022R_B09_BF292870Tu02P018F05P018F111R1_077.ab1   337 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0