No. words: 1711; after pruning: 1657


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:1236)  447  0.63 0.21 0.00  MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1      393   865 (0)  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   (0)   846   373 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1    MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1     1 
  563  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   675 
  579    MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1   579 
  599  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   639 
  603    MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1   603 
  607  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   631 
  623    MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1   623 
  637  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   601 
  641    MoSU035F_D07_BF293371As02P019D04P019D101F1_057.ab1   641 
  645  C MoSU035R_D07_BF293371As02P019D04P019D101R1_057.ab1   593 
Contig length: old 1237, new 1237

Contig length: old 1237, new 1237
New start: 0