No. words: 1695; after pruning: 1655


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:1213)  458  0.62 0.00 0.00  MoSU035F_E07_BF293371At01P019D04P019D101F1_055.ab1      406   886 (0)  C MoSU035R_E07_BF293371At01P019D04P019D101R1_055.ab1   (0)   809   329 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    MoSU035F_E07_BF293371At01P019D04P019D101F1_055.ab1     1 
  563  C MoSU035R_E07_BF293371At01P019D04P019D101R1_055.ab1   652 
  583    MoSU035F_E07_BF293371At01P019D04P019D101F1_055.ab1   583 
  603  C MoSU035R_E07_BF293371At01P019D04P019D101R1_055.ab1   612 
  623    MoSU035F_E07_BF293371At01P019D04P019D101F1_055.ab1   623 
  643  C MoSU035R_E07_BF293371At01P019D04P019D101R1_055.ab1   572 
Contig length: old 1214, new 1214

Contig length: old 1214, new 1214
New start: 0