No. words: 1502; after pruning: 1476


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:1246)  227  0.78 0.00 0.39  MoSU035F_G07_BF293371Ld01P019D04P019D101F1_051.ab1      567   821 (0)  C MoSU035R_G07_BF293371Ld01P019D04P019D101R1_051.ab1   (0)   681   428 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  114 nodes

 59 str. conn. components

Path
    1    MoSU035F_G07_BF293371Ld01P019D04P019D101F1_051.ab1     1 
  650  C MoSU035R_G07_BF293371Ld01P019D04P019D101R1_051.ab1   598 
  662    MoSU035F_G07_BF293371Ld01P019D04P019D101F1_051.ab1   662 
  666  C MoSU035R_G07_BF293371Ld01P019D04P019D101R1_051.ab1   582 
  686    MoSU035F_G07_BF293371Ld01P019D04P019D101F1_051.ab1   686 
  690  C MoSU035R_G07_BF293371Ld01P019D04P019D101R1_051.ab1   558 
Contig length: old 1247, new 1247

Contig length: old 1247, new 1247
New start: 0