No. words: 1318; after pruning: 1292


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.0 (1,1:1247)   49  2.86 0.00 1.43  MoSU035F_H07_BF293371Ld02P019D04P019D101F1_049.ab1      534   603 (0)  C MoSU035R_H07_BF293371Ld02P019D04P019D101R1_049.ab1   (0)   715   647 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  24 nodes

 14 str. conn. components

Path
    1    MoSU035F_H07_BF293371Ld02P019D04P019D101F1_049.ab1     1 
  545  C MoSU035R_H07_BF293371Ld02P019D04P019D101R1_049.ab1   704 
  549    MoSU035F_H07_BF293371Ld02P019D04P019D101F1_049.ab1   549 
  553  C MoSU035R_H07_BF293371Ld02P019D04P019D101R1_049.ab1   696 
Contig length: old 1248, new 1248

Contig length: old 1248, new 1248
New start: 0 
S Change at: 561; seg lengths: entry 1, contig 1