No. words: 1498; after pruning: 1472


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   13    0.0 4.5 (1,1:1244)  215  1.25 0.00 0.00  MoSU035F_G08_BF293371Ld09P019D04P019D101F1_052.ab1      546   785 (0)  C MoSU035R_G08_BF293371Ld09P019D04P019D101R1_052.ab1   (13)   700   461 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
13       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  110 nodes

 57 str. conn. components

Path
    1    MoSU035F_G08_BF293371Ld09P019D04P019D101F1_052.ab1     1 
  566  C MoSU035R_G08_BF293371Ld09P019D04P019D101R1_052.ab1   680 
  578    MoSU035F_G08_BF293371Ld09P019D04P019D101F1_052.ab1   578 
  582  C MoSU035R_G08_BF293371Ld09P019D04P019D101R1_052.ab1   664 
  590    MoSU035F_G08_BF293371Ld09P019D04P019D101F1_052.ab1   590 
  598  C MoSU035R_G08_BF293371Ld09P019D04P019D101R1_052.ab1   648 
Contig length: old 1245, new 1245

Contig length: old 1245, new 1245
New start: 0